Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.69■□□□□ 0.58
Lsm8Q6ZWM4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm8Q6ZWM4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lsm8Q6ZWM4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.66■□□□□ 0.58
Lsm8Q6ZWM4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm8Q6ZWM4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm8Q6ZWM4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.64■□□□□ 0.58
Lsm8Q6ZWM4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm8Q6ZWM4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Gm11643-201ENSMUST00000119578 864 ntBASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm8Q6ZWM4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms