Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx58Q6Q899 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx58Q6Q899 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Gm38027-201ENSMUST00000192315 235 ntBASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx58Q6Q899 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 AC121577.1-201ENSMUST00000227302 707 ntBASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Gm35558-201ENSMUST00000222675 2219 ntBASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx58Q6Q899 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx58Q6Q899 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ddx58Q6Q899 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Gm10231-201ENSMUST00000181584 441 ntBASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Gm10175-202ENSMUST00000208752 441 ntBASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms