Protein–RNA interactions for Protein: Q6PIC6

Atp1a3, Sodium/potassium-transporting ATPase subunit alpha-3, mousemouse

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a3Q6PIC6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp1a3Q6PIC6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp1a3Q6PIC6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp1a3Q6PIC6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp1a3Q6PIC6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp1a3Q6PIC6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp1a3Q6PIC6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Gm6211-202ENSMUST00000167849 925 ntBASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp1a3Q6PIC6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp1a3Q6PIC6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp1a3Q6PIC6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp1a3Q6PIC6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Gm8969-201ENSMUST00000199694 526 ntBASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Atp1a3Q6PIC6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms