Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim45Q6PFY8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim45Q6PFY8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Gm22240-201ENSMUST00000175225 82 ntBASIC16.89■□□□□ 0.29
Trim45Q6PFY8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Gm44549-201ENSMUST00000208351 577 ntBASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim45Q6PFY8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim45Q6PFY8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Trmt13-210ENSMUST00000198454 880 ntBASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim45Q6PFY8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Dio3-201ENSMUST00000097228 1449 ntBASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim45Q6PFY8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Gm13168-201ENSMUST00000121771 632 ntBASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Gm2559-201ENSMUST00000201323 363 ntBASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim45Q6PFY8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim45Q6PFY8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms