Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snrnp40Q6PE01 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Gm5587-201ENSMUST00000206270 674 ntBASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp40Q6PE01 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp40Q6PE01 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Gm24841-201ENSMUST00000158676 357 ntBASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Gm7370-201ENSMUST00000219471 767 ntBASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp40Q6PE01 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Gm9013-201ENSMUST00000132939 882 ntBASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp40Q6PE01 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Snrnp40Q6PE01 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp40Q6PE01 Gm29518-201ENSMUST00000190858 372 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms