Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf220Q6PDX6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Rnf220Q6PDX6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rnf220Q6PDX6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf220Q6PDX6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Gm43137-201ENSMUST00000198052 594 ntBASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Gm8969-201ENSMUST00000199694 526 ntBASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf220Q6PDX6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf220Q6PDX6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf220Q6PDX6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Rnf220Q6PDX6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf220Q6PDX6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf220Q6PDX6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms