Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chd4Q6PDQ2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Chd4Q6PDQ2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chd4Q6PDQ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chd4Q6PDQ2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Golph3-205ENSMUST00000228671 2842 ntBASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.34
Chd4Q6PDQ2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Chd4Q6PDQ2 Mir1668-201ENSMUST00000184114 107 ntBASIC23.39■■□□□ 1.34
Chd4Q6PDQ2 Ank2-226ENSMUST00000189368 339 ntBASIC23.39■■□□□ 1.34
Chd4Q6PDQ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
Chd4Q6PDQ2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Chd4Q6PDQ2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Spsb2-203ENSMUST00000112473 1322 ntBASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd4Q6PDQ2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 Idnk-204ENSMUST00000226010 1898 ntBASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC23.37■■□□□ 1.33
Chd4Q6PDQ2 Gm18958-201ENSMUST00000174258 762 ntBASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Mir5130-201ENSMUST00000175160 84 ntBASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Gm5587-201ENSMUST00000206270 674 ntBASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Chd4Q6PDQ2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Gm22697-201ENSMUST00000175194 63 ntBASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Gm9013-201ENSMUST00000132939 882 ntBASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd4Q6PDQ2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd4Q6PDQ2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC23.33■■□□□ 1.33
Chd4Q6PDQ2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Chd4Q6PDQ2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
Chd4Q6PDQ2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Chd4Q6PDQ2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms