Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Gm8520-201ENSMUST00000186517 868 ntBASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Idnk-204ENSMUST00000226010 1898 ntBASIC20.77■□□□□ 0.92
Smarcc2Q6PDG5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Smarcc2Q6PDG5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcc2Q6PDG5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcc2Q6PDG5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Gm13168-201ENSMUST00000121771 632 ntBASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc2Q6PDG5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc2Q6PDG5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Zfp783-201ENSMUST00000095946 670 ntBASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc2Q6PDG5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Gm22240-201ENSMUST00000175225 82 ntBASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc2Q6PDG5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc2Q6PDG5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Flg-201ENSMUST00000050758 1488 ntBASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Gm11249-201ENSMUST00000117071 859 ntBASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Gm8969-201ENSMUST00000199694 526 ntBASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms