Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Casc4Q6P2L7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Casc4Q6P2L7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Casc4Q6P2L7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casc4Q6P2L7 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Gm20760-201ENSMUST00000179197 648 ntBASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Gm37856-201ENSMUST00000191634 999 ntBASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Trmt13-210ENSMUST00000198454 880 ntBASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Dio3-201ENSMUST00000097228 1449 ntBASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casc4Q6P2L7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Casc4Q6P2L7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Casc4Q6P2L7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Casc4Q6P2L7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Gm11927-201ENSMUST00000118472 759 ntBASIC18.01■□□□□ 0.47
Casc4Q6P2L7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.01■□□□□ 0.47
Casc4Q6P2L7 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.01■□□□□ 0.47
Casc4Q6P2L7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casc4Q6P2L7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Casc4Q6P2L7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Casc4Q6P2L7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Casc4Q6P2L7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Mtag2-201ENSMUST00000058665 714 ntBASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Casc4Q6P2L7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Casc4Q6P2L7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms