Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Mir1668-201ENSMUST00000184114 107 ntBASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf8Q6DID3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf8Q6DID3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Scaf8Q6DID3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Gm11950-201ENSMUST00000121615 838 ntBASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Gm18958-201ENSMUST00000174258 762 ntBASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Gm18115-201ENSMUST00000221209 621 ntBASIC20.79■□□□□ 0.92
Scaf8Q6DID3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Gm10566-201ENSMUST00000086739 996 ntBASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.79■□□□□ 0.92
Scaf8Q6DID3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Gm24841-201ENSMUST00000158676 357 ntBASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scaf8Q6DID3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Gm43514-201ENSMUST00000198852 424 ntBASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf8Q6DID3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scaf8Q6DID3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Gm11355-201ENSMUST00000121120 306 ntBASIC20.76■□□□□ 0.91
Scaf8Q6DID3 AW822252-206ENSMUST00000208904 237 ntBASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf8Q6DID3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf8Q6DID3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms