Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.21■□□□□ 0.99
Ltn1Q6A009 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Gm17807-201ENSMUST00000186869 298 ntBASIC21.21■□□□□ 0.99
Ltn1Q6A009 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Notumos-201ENSMUST00000151998 2659 ntBASIC21.21■□□□□ 0.99
Ltn1Q6A009 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ltn1Q6A009 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ltn1Q6A009 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.2■□□□□ 0.98
Ltn1Q6A009 Gm13474-201ENSMUST00000122466 815 ntBASIC21.2■□□□□ 0.98
Ltn1Q6A009 Gm29518-201ENSMUST00000190858 372 ntBASIC21.2■□□□□ 0.98
Ltn1Q6A009 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ltn1Q6A009 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ltn1Q6A009 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ltn1Q6A009 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ltn1Q6A009 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.19■□□□□ 0.98
Ltn1Q6A009 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.19■□□□□ 0.98
Ltn1Q6A009 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.18■□□□□ 0.98
Ltn1Q6A009 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.18■□□□□ 0.98
Ltn1Q6A009 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Gm25016-201ENSMUST00000158399 131 ntBASIC21.18■□□□□ 0.98
Ltn1Q6A009 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Gm27704-201ENSMUST00000185094 107 ntBASIC21.18■□□□□ 0.98
Ltn1Q6A009 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.18■□□□□ 0.98
Ltn1Q6A009 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ltn1Q6A009 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ltn1Q6A009 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ltn1Q6A009 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ltn1Q6A009 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Gm17808-201ENSMUST00000200859 894 ntBASIC21.16■□□□□ 0.98
Ltn1Q6A009 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ltn1Q6A009 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Ltn1Q6A009 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ltn1Q6A009 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
Ltn1Q6A009 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ltn1Q6A009 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Il3ra-202ENSMUST00000223589 738 ntBASIC21.14■□□□□ 0.97
Ltn1Q6A009 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ltn1Q6A009 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms