Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.51■□□□□ 0.39
VclQ64727 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.51■□□□□ 0.39
VclQ64727 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.51■□□□□ 0.39
VclQ64727 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.51■□□□□ 0.39
VclQ64727 Mtag2-201ENSMUST00000058665 714 ntBASIC17.51■□□□□ 0.39
VclQ64727 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VclQ64727 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VclQ64727 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VclQ64727 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VclQ64727 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VclQ64727 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
VclQ64727 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.5■□□□□ 0.39
VclQ64727 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.5■□□□□ 0.39
VclQ64727 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.5■□□□□ 0.39
VclQ64727 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VclQ64727 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.5■□□□□ 0.39
VclQ64727 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.5■□□□□ 0.39
VclQ64727 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VclQ64727 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VclQ64727 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VclQ64727 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VclQ64727 Gm15375-201ENSMUST00000119510 849 ntBASIC17.49■□□□□ 0.39
VclQ64727 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.49■□□□□ 0.39
VclQ64727 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.49■□□□□ 0.39
VclQ64727 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.49■□□□□ 0.39
VclQ64727 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VclQ64727 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VclQ64727 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Mir6349-201ENSMUST00000184059 97 ntBASIC17.48■□□□□ 0.39
VclQ64727 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Tgds-204ENSMUST00000228543 1594 ntBASIC17.48■□□□□ 0.39
VclQ64727 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VclQ64727 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.48■□□□□ 0.39
VclQ64727 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VclQ64727 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.47■□□□□ 0.39
VclQ64727 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VclQ64727 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
VclQ64727 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
VclQ64727 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.46■□□□□ 0.39
VclQ64727 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
VclQ64727 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VclQ64727 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
VclQ64727 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VclQ64727 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.45■□□□□ 0.38
VclQ64727 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.45■□□□□ 0.38
VclQ64727 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VclQ64727 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
VclQ64727 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VclQ64727 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.44■□□□□ 0.38
VclQ64727 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VclQ64727 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms