Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.4■□□□□ 0.38
Six3Q62233 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Six3Q62233 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Six3Q62233 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six3Q62233 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Six3Q62233 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six3Q62233 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six3Q62233 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Gm8495-201ENSMUST00000188740 694 ntBASIC17.39■□□□□ 0.37
Six3Q62233 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.39■□□□□ 0.37
Six3Q62233 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six3Q62233 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.39■□□□□ 0.37
Six3Q62233 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.39■□□□□ 0.37
Six3Q62233 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Six3Q62233 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six3Q62233 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
Six3Q62233 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.37■□□□□ 0.37
Six3Q62233 Gm7290-201ENSMUST00000104990 617 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Gm12918-201ENSMUST00000120234 636 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Gm15710-201ENSMUST00000121821 636 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Gm5075-201ENSMUST00000196916 622 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.37■□□□□ 0.37
Six3Q62233 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Six3Q62233 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six3Q62233 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Six3Q62233 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Six3Q62233 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Six3Q62233 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.36■□□□□ 0.37
Six3Q62233 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.36■□□□□ 0.37
Six3Q62233 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Six3Q62233 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Six3Q62233 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.36■□□□□ 0.37
Six3Q62233 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.36■□□□□ 0.37
Six3Q62233 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six3Q62233 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six3Q62233 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six3Q62233 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six3Q62233 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six3Q62233 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms