Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VcanQ62059 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VcanQ62059 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.78■□□□□ 0.28
VcanQ62059 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VcanQ62059 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
VcanQ62059 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.78■□□□□ 0.28
VcanQ62059 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VcanQ62059 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VcanQ62059 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VcanQ62059 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
VcanQ62059 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VcanQ62059 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VcanQ62059 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VcanQ62059 Grk6-206ENSMUST00000224995 2971 ntBASIC16.78■□□□□ 0.28
VcanQ62059 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VcanQ62059 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VcanQ62059 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VcanQ62059 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VcanQ62059 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VcanQ62059 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VcanQ62059 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VcanQ62059 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.77■□□□□ 0.27
VcanQ62059 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VcanQ62059 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.77■□□□□ 0.27
VcanQ62059 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.77■□□□□ 0.27
VcanQ62059 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VcanQ62059 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.77■□□□□ 0.27
VcanQ62059 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VcanQ62059 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VcanQ62059 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VcanQ62059 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.76■□□□□ 0.27
VcanQ62059 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VcanQ62059 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VcanQ62059 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VcanQ62059 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VcanQ62059 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VcanQ62059 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.76■□□□□ 0.27
VcanQ62059 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.76■□□□□ 0.27
VcanQ62059 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VcanQ62059 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.75■□□□□ 0.27
VcanQ62059 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.75■□□□□ 0.27
VcanQ62059 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VcanQ62059 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
VcanQ62059 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VcanQ62059 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VcanQ62059 Gm27702-201ENSMUST00000184512 56 ntBASIC16.74■□□□□ 0.27
VcanQ62059 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.74■□□□□ 0.27
VcanQ62059 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VcanQ62059 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.74■□□□□ 0.27
VcanQ62059 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VcanQ62059 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VcanQ62059 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.73■□□□□ 0.27
VcanQ62059 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.73■□□□□ 0.27
VcanQ62059 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.73■□□□□ 0.27
VcanQ62059 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.73■□□□□ 0.27
VcanQ62059 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VcanQ62059 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
VcanQ62059 Mir1668-201ENSMUST00000184114 107 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms