Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ctr9Q62018 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ctr9Q62018 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.96■□□□□ 0.95
Ctr9Q62018 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctr9Q62018 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ctr9Q62018 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ctr9Q62018 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Ctr9Q62018 Gm37055-201ENSMUST00000191866 133 ntBASIC20.95■□□□□ 0.94
Ctr9Q62018 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ctr9Q62018 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ctr9Q62018 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ctr9Q62018 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.95■□□□□ 0.94
Ctr9Q62018 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ctr9Q62018 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ctr9Q62018 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ctr9Q62018 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctr9Q62018 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.94■□□□□ 0.94
Ctr9Q62018 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.94■□□□□ 0.94
Ctr9Q62018 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.94■□□□□ 0.94
Ctr9Q62018 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.94■□□□□ 0.94
Ctr9Q62018 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Ctr9Q62018 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctr9Q62018 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctr9Q62018 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Ctr9Q62018 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.93■□□□□ 0.94
Ctr9Q62018 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.93■□□□□ 0.94
Ctr9Q62018 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctr9Q62018 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.93■□□□□ 0.94
Ctr9Q62018 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ctr9Q62018 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.92■□□□□ 0.94
Ctr9Q62018 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ctr9Q62018 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
Ctr9Q62018 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.92■□□□□ 0.94
Ctr9Q62018 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctr9Q62018 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Gm11643-201ENSMUST00000119578 864 ntBASIC20.91■□□□□ 0.94
Ctr9Q62018 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ctr9Q62018 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.91■□□□□ 0.94
Ctr9Q62018 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.91■□□□□ 0.94
Ctr9Q62018 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms