Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six4Q61321 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six4Q61321 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six4Q61321 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six4Q61321 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.99■□□□□ 0.47
Six4Q61321 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six4Q61321 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six4Q61321 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Six4Q61321 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Six4Q61321 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.98■□□□□ 0.47
Six4Q61321 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Six4Q61321 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six4Q61321 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.97■□□□□ 0.47
Six4Q61321 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.97■□□□□ 0.47
Six4Q61321 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six4Q61321 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.96■□□□□ 0.47
Six4Q61321 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Gm13401-201ENSMUST00000117074 291 ntBASIC17.96■□□□□ 0.47
Six4Q61321 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Gm8520-201ENSMUST00000186517 868 ntBASIC17.96■□□□□ 0.47
Six4Q61321 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.96■□□□□ 0.47
Six4Q61321 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Six4Q61321 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six4Q61321 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Six4Q61321 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Six4Q61321 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Six4Q61321 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Gm29791-202ENSMUST00000207888 369 ntBASIC17.95■□□□□ 0.46
Six4Q61321 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six4Q61321 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Six4Q61321 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Gm37292-201ENSMUST00000192062 758 ntBASIC17.94■□□□□ 0.46
Six4Q61321 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.94■□□□□ 0.46
Six4Q61321 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six4Q61321 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.94■□□□□ 0.46
Six4Q61321 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Six4Q61321 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Six4Q61321 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.93■□□□□ 0.46
Six4Q61321 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six4Q61321 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Six4Q61321 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Six4Q61321 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.92■□□□□ 0.46
Six4Q61321 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms