Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Gm6433-201ENSMUST00000118634 875 ntBASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Odf3b-204ENSMUST00000227834 930 ntBASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shroom1Q5SX79 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shroom1Q5SX79 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.93■□□□□ 0.62
Shroom1Q5SX79 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Gm9987-201ENSMUST00000069768 567 ntBASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.93■□□□□ 0.62
Shroom1Q5SX79 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.92■□□□□ 0.62
Shroom1Q5SX79 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Gm43799-201ENSMUST00000201845 579 ntBASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom1Q5SX79 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom1Q5SX79 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom1Q5SX79 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms