Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-1Q5R1I8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-1Q5R1I8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-1Q5R1I8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-1Q5R1I8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-1Q5R1I8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-1Q5R1I8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Prob1-201ENSMUST00000097619 3021 ntBASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-1Q5R1I8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Gm24970-201ENSMUST00000175582 82 ntBASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms