Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-2Q5R1I4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-2Q5R1I4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-2Q5R1I4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Gm10418-201ENSMUST00000100943 576 ntBASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Gm38027-201ENSMUST00000192315 235 ntBASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Gm4974-201ENSMUST00000209974 875 ntBASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-2Q5R1I4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Gm6659-201ENSMUST00000174752 547 ntBASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-2Q5R1I4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav6-2Q5R1I4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Gm2274-201ENSMUST00000184539 609 ntBASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-2Q5R1I4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-2Q5R1I4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-2Q5R1I4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-2Q5R1I4 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms