Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5d-4Q5R1F6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5d-4Q5R1F6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5d-4Q5R1F6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5d-4Q5R1F6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Gm2399-201ENSMUST00000104944 225 ntBASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Gm26524-201ENSMUST00000192339 390 ntBASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav5d-4Q5R1F6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms