Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-3Q5R1E6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-3Q5R1E6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 AV356131-201ENSMUST00000206201 750 ntBASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-3Q5R1E6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Gm5874-201ENSMUST00000096101 508 ntBASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-3Q5R1E6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-3Q5R1E6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-3Q5R1E6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-3Q5R1E6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.27□□□□□ -0.12
Trav6-3Q5R1E6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav6-3Q5R1E6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-3Q5R1E6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms