Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps13aQ5H8C4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.73■□□□□ 0.43
Vps13aQ5H8C4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13aQ5H8C4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13aQ5H8C4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps13aQ5H8C4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.71■□□□□ 0.42
Vps13aQ5H8C4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps13aQ5H8C4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Mir1668-201ENSMUST00000184114 107 ntBASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps13aQ5H8C4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Olfr129-201ENSMUST00000122318 993 ntBASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.69■□□□□ 0.42
Vps13aQ5H8C4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13aQ5H8C4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms