Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf20Q5DTM8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf20Q5DTM8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf20Q5DTM8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Gm2559-201ENSMUST00000201323 363 ntBASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf20Q5DTM8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rnf20Q5DTM8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf20Q5DTM8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Gm11927-201ENSMUST00000118472 759 ntBASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf20Q5DTM8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Gm4968-201ENSMUST00000071458 858 ntBASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf20Q5DTM8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rnf20Q5DTM8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rnf20Q5DTM8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf20Q5DTM8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms