Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn2bQ56A07 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Scn2bQ56A07 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.64■□□□□ 0.41
Scn2bQ56A07 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn2bQ56A07 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2bQ56A07 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.63■□□□□ 0.41
Scn2bQ56A07 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.63■□□□□ 0.41
Scn2bQ56A07 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Gm10602-201ENSMUST00000098239 609 ntBASIC17.63■□□□□ 0.41
Scn2bQ56A07 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2bQ56A07 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn2bQ56A07 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Gm6365-201ENSMUST00000054711 744 ntBASIC17.62■□□□□ 0.41
Scn2bQ56A07 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn2bQ56A07 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.61■□□□□ 0.41
Scn2bQ56A07 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.61■□□□□ 0.41
Scn2bQ56A07 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2bQ56A07 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.6■□□□□ 0.41
Scn2bQ56A07 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2bQ56A07 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Gm12933-201ENSMUST00000120203 872 ntBASIC17.59■□□□□ 0.41
Scn2bQ56A07 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Mir5133-201ENSMUST00000174955 77 ntBASIC17.59■□□□□ 0.41
Scn2bQ56A07 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn2bQ56A07 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms