Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tmem40Q4FJU9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmem40Q4FJU9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Mtag2-201ENSMUST00000058665 714 ntBASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tmem40Q4FJU9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmem40Q4FJU9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Gm11434-201ENSMUST00000122379 629 ntBASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Gm43183-201ENSMUST00000200632 547 ntBASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Gm30025-201ENSMUST00000218555 728 ntBASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmem40Q4FJU9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms