Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1d1Q3UV55 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Reep4-203ENSMUST00000226563 1444 ntBASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.78■□□□□ 0.6
Nr1d1Q3UV55 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Gm12933-201ENSMUST00000120203 872 ntBASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nr1d1Q3UV55 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1d1Q3UV55 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1d1Q3UV55 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1d1Q3UV55 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nr1d1Q3UV55 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nr1d1Q3UV55 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nr1d1Q3UV55 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms