Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Dio3-201ENSMUST00000097228 1449 ntBASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl5Q3UTQ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl5Q3UTQ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdkl5Q3UTQ8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.64■□□□□ 0.89
Cdkl5Q3UTQ8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Gm12896-201ENSMUST00000118430 226 ntBASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl5Q3UTQ8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkl5Q3UTQ8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Gm12441-201ENSMUST00000121806 588 ntBASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Gm8969-201ENSMUST00000199694 526 ntBASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkl5Q3UTQ8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms