Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lsmem1Q3UQS2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsmem1Q3UQS2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsmem1Q3UQS2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
Lsmem1Q3UQS2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsmem1Q3UQS2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Gm22240-201ENSMUST00000175225 82 ntBASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Gm43183-201ENSMUST00000200632 547 ntBASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsmem1Q3UQS2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsmem1Q3UQS2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.02■□□□□ 0.48
Lsmem1Q3UQS2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lsmem1Q3UQS2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lsmem1Q3UQS2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms