Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Etf1-202ENSMUST00000180351 108 ntBASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Cks1brtQ3UNC9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.9□□□□□ -0.34
Cks1brtQ3UNC9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cks1brtQ3UNC9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks1brtQ3UNC9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.88□□□□□ -0.35
Cks1brtQ3UNC9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cks1brtQ3UNC9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms