Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smu1Q3UKJ7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smu1Q3UKJ7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Smu1Q3UKJ7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smu1Q3UKJ7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smu1Q3UKJ7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 AV356131-201ENSMUST00000206201 750 ntBASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smu1Q3UKJ7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smu1Q3UKJ7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms