Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.49■□□□□ 0.23
Spg11Q3UHA3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Spg11Q3UHA3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.48■□□□□ 0.23
Spg11Q3UHA3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44454-201ENSMUST00000198541 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Spg11Q3UHA3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Spg11Q3UHA3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms