Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.24■□□□□ 0.99
Col5a2Q3U962 AW822252-206ENSMUST00000208904 237 ntBASIC21.24■□□□□ 0.99
Col5a2Q3U962 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col5a2Q3U962 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Gm27742-201ENSMUST00000184667 60 ntBASIC21.23■□□□□ 0.99
Col5a2Q3U962 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col5a2Q3U962 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col5a2Q3U962 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Col5a2Q3U962 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col5a2Q3U962 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col5a2Q3U962 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col5a2Q3U962 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col5a2Q3U962 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.2■□□□□ 0.99
Col5a2Q3U962 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.2■□□□□ 0.98
Col5a2Q3U962 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col5a2Q3U962 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col5a2Q3U962 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col5a2Q3U962 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col5a2Q3U962 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.19■□□□□ 0.98
Col5a2Q3U962 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col5a2Q3U962 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Col5a2Q3U962 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col5a2Q3U962 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.17■□□□□ 0.98
Col5a2Q3U962 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Gm10566-201ENSMUST00000086739 996 ntBASIC21.17■□□□□ 0.98
Col5a2Q3U962 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col5a2Q3U962 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Gm10418-201ENSMUST00000100943 576 ntBASIC21.16■□□□□ 0.98
Col5a2Q3U962 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col5a2Q3U962 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col5a2Q3U962 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col5a2Q3U962 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.15■□□□□ 0.98
Col5a2Q3U962 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col5a2Q3U962 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.15■□□□□ 0.98
Col5a2Q3U962 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col5a2Q3U962 Birc2-201ENSMUST00000054878 378 ntBASIC21.15■□□□□ 0.98
Col5a2Q3U962 Gm5867-201ENSMUST00000063197 592 ntBASIC21.15■□□□□ 0.98
Col5a2Q3U962 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col5a2Q3U962 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col5a2Q3U962 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms