Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.3□□□□□ -0.44
Cops9Q3U898 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cops9Q3U898 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cops9Q3U898 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cops9Q3U898 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cops9Q3U898 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.29□□□□□ -0.44
Cops9Q3U898 Serp2-204ENSMUST00000228055 705 ntBASIC12.29□□□□□ -0.44
Cops9Q3U898 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.29□□□□□ -0.44
Cops9Q3U898 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.29□□□□□ -0.44
Cops9Q3U898 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.29□□□□□ -0.44
Cops9Q3U898 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops9Q3U898 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cops9Q3U898 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.28□□□□□ -0.44
Cops9Q3U898 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops9Q3U898 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops9Q3U898 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cops9Q3U898 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cops9Q3U898 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops9Q3U898 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops9Q3U898 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cops9Q3U898 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Cops9Q3U898 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cops9Q3U898 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cops9Q3U898 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.27□□□□□ -0.45
Cops9Q3U898 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops9Q3U898 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cops9Q3U898 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cops9Q3U898 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cops9Q3U898 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.26□□□□□ -0.45
Cops9Q3U898 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops9Q3U898 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms