Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.94■□□□□ 0.3
Khdc4Q3TCX3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Gm7977-201ENSMUST00000193787 748 ntBASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Flg-201ENSMUST00000050758 1488 ntBASIC16.93■□□□□ 0.3
Khdc4Q3TCX3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Khdc4Q3TCX3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Khdc4Q3TCX3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Mir1199-201ENSMUST00000117015 119 ntBASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Gm11927-201ENSMUST00000118472 759 ntBASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Khdc4Q3TCX3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms