Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim63Q38HM4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.81□□□□□ -0.04
Trim63Q38HM4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim63Q38HM4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim63Q38HM4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trim63Q38HM4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Mir6236-201ENSMUST00000184437 123 ntBASIC14.79□□□□□ -0.04
Trim63Q38HM4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.79□□□□□ -0.04
Trim63Q38HM4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim63Q38HM4 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.79□□□□□ -0.04
Trim63Q38HM4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms