Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Gm20949-201ENSMUST00000206478 952 ntBASIC9.6□□□□□ -0.87
Ush2AQ2QI47 AC120002.2-201ENSMUST00000220205 773 ntBASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ush2AQ2QI47 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.59□□□□□ -0.87
Ush2AQ2QI47 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Gm15372-201ENSMUST00000120729 834 ntBASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Gm23547-201ENSMUST00000158210 271 ntBASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Gm15653-201ENSMUST00000119247 907 ntBASIC9.58□□□□□ -0.88
Ush2AQ2QI47 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ush2AQ2QI47 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm6376-201ENSMUST00000209407 580 ntBASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm14140-201ENSMUST00000119999 995 ntBASIC9.57□□□□□ -0.88
Ush2AQ2QI47 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Cxcl14-202ENSMUST00000224801 1467 ntBASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm13616-201ENSMUST00000120600 222 ntBASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm11424-201ENSMUST00000121929 829 ntBASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm5540-201ENSMUST00000131852 1848 ntBASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ush2AQ2QI47 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.56□□□□□ -0.88
Ush2AQ2QI47 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ush2AQ2QI47 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms