Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Gm12933-201ENSMUST00000120203 872 ntBASIC19.82■□□□□ 0.76
Ssrp1Q08943 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Gm26524-201ENSMUST00000192339 390 ntBASIC19.82■□□□□ 0.76
Ssrp1Q08943 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Rab3c-203ENSMUST00000224180 967 ntBASIC19.82■□□□□ 0.76
Ssrp1Q08943 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssrp1Q08943 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ssrp1Q08943 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssrp1Q08943 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssrp1Q08943 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.79■□□□□ 0.76
Ssrp1Q08943 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.79■□□□□ 0.76
Ssrp1Q08943 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Ssrp1Q08943 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Gm38285-201ENSMUST00000192928 922 ntBASIC19.78■□□□□ 0.76
Ssrp1Q08943 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.78■□□□□ 0.76
Ssrp1Q08943 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssrp1Q08943 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.77■□□□□ 0.76
Ssrp1Q08943 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssrp1Q08943 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ssrp1Q08943 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ssrp1Q08943 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ssrp1Q08943 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Flg-201ENSMUST00000050758 1488 ntBASIC19.76■□□□□ 0.75
Ssrp1Q08943 Gm5408-201ENSMUST00000197998 747 ntBASIC19.76■□□□□ 0.75
Ssrp1Q08943 Zfp783-201ENSMUST00000095946 670 ntBASIC19.76■□□□□ 0.75
Ssrp1Q08943 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms