Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tff1Q08423 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tff1Q08423 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tff1Q08423 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.81□□□□□ -0.04
Tff1Q08423 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tff1Q08423 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tff1Q08423 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tff1Q08423 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tff1Q08423 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tff1Q08423 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Tff1Q08423 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.8□□□□□ -0.04
Tff1Q08423 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tff1Q08423 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tff1Q08423 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.8□□□□□ -0.04
Tff1Q08423 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.8□□□□□ -0.04
Tff1Q08423 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tff1Q08423 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.8□□□□□ -0.04
Tff1Q08423 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.79□□□□□ -0.04
Tff1Q08423 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.79□□□□□ -0.04
Tff1Q08423 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tff1Q08423 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Tff1Q08423 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tff1Q08423 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.78□□□□□ -0.04
Tff1Q08423 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Gm4968-201ENSMUST00000071458 858 ntBASIC14.78□□□□□ -0.04
Tff1Q08423 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tff1Q08423 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.78□□□□□ -0.04
Tff1Q08423 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.78□□□□□ -0.04
Tff1Q08423 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tff1Q08423 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.77□□□□□ -0.04
Tff1Q08423 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Tff1Q08423 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Tff1Q08423 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Tff1Q08423 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tff1Q08423 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Tff1Q08423 Gm13146-201ENSMUST00000118508 780 ntBASIC14.77□□□□□ -0.05
Tff1Q08423 Gm8520-201ENSMUST00000186517 868 ntBASIC14.77□□□□□ -0.05
Tff1Q08423 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Tff1Q08423 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tff1Q08423 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.76□□□□□ -0.05
Tff1Q08423 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Tff1Q08423 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Tff1Q08423 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tff1Q08423 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms