Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hspg2Q05793 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hspg2Q05793 Mir2861-201ENSMUST00000175539 82 ntBASIC13.21□□□□□ -0.3
Hspg2Q05793 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.21□□□□□ -0.3
Hspg2Q05793 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gm2274-201ENSMUST00000184539 609 ntBASIC13.2□□□□□ -0.3
Hspg2Q05793 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.2□□□□□ -0.3
Hspg2Q05793 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gm18115-201ENSMUST00000221209 621 ntBASIC13.2□□□□□ -0.3
Hspg2Q05793 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.2□□□□□ -0.3
Hspg2Q05793 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hspg2Q05793 Gm27742-201ENSMUST00000184667 60 ntBASIC13.2□□□□□ -0.3
Hspg2Q05793 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Hspg2Q05793 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.19□□□□□ -0.3
Hspg2Q05793 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.19□□□□□ -0.3
Hspg2Q05793 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Hspg2Q05793 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hspg2Q05793 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.18□□□□□ -0.3
Hspg2Q05793 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.18□□□□□ -0.3
Hspg2Q05793 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.18□□□□□ -0.3
Hspg2Q05793 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hspg2Q05793 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.18□□□□□ -0.3
Hspg2Q05793 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.18□□□□□ -0.3
Hspg2Q05793 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hspg2Q05793 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.17□□□□□ -0.3
Hspg2Q05793 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hspg2Q05793 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hspg2Q05793 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Gm6623-201ENSMUST00000173570 544 ntBASIC13.16□□□□□ -0.3
Hspg2Q05793 Gm27463-201ENSMUST00000183569 57 ntBASIC13.16□□□□□ -0.3
Hspg2Q05793 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.16□□□□□ -0.3
Hspg2Q05793 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hspg2Q05793 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Gm11950-201ENSMUST00000121615 838 ntBASIC13.16□□□□□ -0.3
Hspg2Q05793 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms