Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.6■□□□□ 0.25
Emx1Q04742 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Gm7514-201ENSMUST00000209475 934 ntBASIC16.6■□□□□ 0.25
Emx1Q04742 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.6■□□□□ 0.25
Emx1Q04742 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Emx1Q04742 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Emx1Q04742 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.6■□□□□ 0.25
Emx1Q04742 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.6■□□□□ 0.25
Emx1Q04742 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Emx1Q04742 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.6■□□□□ 0.25
Emx1Q04742 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
Emx1Q04742 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Emx1Q04742 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Emx1Q04742 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.59■□□□□ 0.25
Emx1Q04742 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Emx1Q04742 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Emx1Q04742 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Emx1Q04742 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Emx1Q04742 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Emx1Q04742 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Emx1Q04742 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Emx1Q04742 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Emx1Q04742 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Emx1Q04742 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Emx1Q04742 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Emx1Q04742 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Emx1Q04742 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Emx1Q04742 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Emx1Q04742 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.58■□□□□ 0.24
Emx1Q04742 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Emx1Q04742 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.58■□□□□ 0.24
Emx1Q04742 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.57■□□□□ 0.24
Emx1Q04742 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Emx1Q04742 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Emx1Q04742 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.57■□□□□ 0.24
Emx1Q04742 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Emx1Q04742 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Emx1Q04742 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Emx1Q04742 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Emx1Q04742 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Emx1Q04742 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Emx1Q04742 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Emx1Q04742 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Emx1Q04742 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Emx1Q04742 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Emx1Q04742 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Emx1Q04742 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms