Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smn1P97801 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.3■□□□□ 0.04
Smn1P97801 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.3■□□□□ 0.04
Smn1P97801 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Smn1P97801 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smn1P97801 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smn1P97801 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Smn1P97801 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smn1P97801 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Gm8969-201ENSMUST00000199694 526 ntBASIC15.29■□□□□ 0.04
Smn1P97801 Gm43060-201ENSMUST00000200621 289 ntBASIC15.29■□□□□ 0.04
Smn1P97801 Gm9988-201ENSMUST00000069786 435 ntBASIC15.29■□□□□ 0.04
Smn1P97801 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Smn1P97801 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.29■□□□□ 0.04
Smn1P97801 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.29■□□□□ 0.04
Smn1P97801 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smn1P97801 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smn1P97801 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.28■□□□□ 0.04
Smn1P97801 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.28■□□□□ 0.04
Smn1P97801 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smn1P97801 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smn1P97801 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.28■□□□□ 0.04
Smn1P97801 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Smn1P97801 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smn1P97801 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smn1P97801 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smn1P97801 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Smn1P97801 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.27■□□□□ 0.04
Smn1P97801 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.27■□□□□ 0.04
Smn1P97801 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smn1P97801 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smn1P97801 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smn1P97801 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smn1P97801 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smn1P97801 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smn1P97801 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Smn1P97801 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smn1P97801 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Smn1P97801 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smn1P97801 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.26■□□□□ 0.03
Smn1P97801 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smn1P97801 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.26■□□□□ 0.03
Smn1P97801 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.26■□□□□ 0.03
Smn1P97801 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms