Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.81■□□□□ 0.28
Nkx3-2P97503 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx3-2P97503 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.8■□□□□ 0.28
Nkx3-2P97503 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx3-2P97503 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.8■□□□□ 0.28
Nkx3-2P97503 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx3-2P97503 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx3-2P97503 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.77■□□□□ 0.28
Nkx3-2P97503 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Gm715-201ENSMUST00000117865 831 ntBASIC16.77■□□□□ 0.28
Nkx3-2P97503 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx3-2P97503 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms