Protein–RNA interactions for Protein: P97291

Cdh8, Cadherin-8, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh8P97291 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh8P97291 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh8P97291 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.86■□□□□ 0.61
Cdh8P97291 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdh8P97291 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Gm37292-201ENSMUST00000192062 758 ntBASIC18.86■□□□□ 0.61
Cdh8P97291 Gm43183-201ENSMUST00000200632 547 ntBASIC18.86■□□□□ 0.61
Cdh8P97291 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Cdh8P97291 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cdh8P97291 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh8P97291 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cdh8P97291 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdh8P97291 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh8P97291 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.85■□□□□ 0.61
Cdh8P97291 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.85■□□□□ 0.61
Cdh8P97291 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.85■□□□□ 0.61
Cdh8P97291 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh8P97291 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh8P97291 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh8P97291 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.84■□□□□ 0.61
Cdh8P97291 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdh8P97291 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cdh8P97291 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.84■□□□□ 0.61
Cdh8P97291 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh8P97291 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh8P97291 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh8P97291 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Cdh8P97291 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh8P97291 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh8P97291 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh8P97291 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.83■□□□□ 0.6
Cdh8P97291 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdh8P97291 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cdh8P97291 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.83■□□□□ 0.6
Cdh8P97291 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh8P97291 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.82■□□□□ 0.6
Cdh8P97291 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.82■□□□□ 0.6
Cdh8P97291 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Cdh8P97291 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdh8P97291 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdh8P97291 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.82■□□□□ 0.6
Cdh8P97291 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh8P97291 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cdh8P97291 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh8P97291 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh8P97291 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh8P97291 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh8P97291 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh8P97291 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms