Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx1P63006 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx1P63006 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx1P63006 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx1P63006 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx1P63006 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx1P63006 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lhx1P63006 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx1P63006 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx1P63006 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx1P63006 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx1P63006 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx1P63006 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lhx1P63006 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx1P63006 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx1P63006 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx1P63006 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx1P63006 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lhx1P63006 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.5■□□□□ 0.39
Lhx1P63006 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.5■□□□□ 0.39
Lhx1P63006 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.5■□□□□ 0.39
Lhx1P63006 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Lhx1P63006 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lhx1P63006 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx1P63006 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Lhx1P63006 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx1P63006 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lhx1P63006 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.49■□□□□ 0.39
Lhx1P63006 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx1P63006 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.48■□□□□ 0.39
Lhx1P63006 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lhx1P63006 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lhx1P63006 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.48■□□□□ 0.39
Lhx1P63006 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx1P63006 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx1P63006 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx1P63006 Mir6982-201ENSMUST00000184354 68 ntBASIC17.48■□□□□ 0.39
Lhx1P63006 Gm29791-202ENSMUST00000207888 369 ntBASIC17.48■□□□□ 0.39
Lhx1P63006 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx1P63006 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx1P63006 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.48■□□□□ 0.39
Lhx1P63006 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx1P63006 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.47■□□□□ 0.39
Lhx1P63006 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.47■□□□□ 0.39
Lhx1P63006 Mir5122-201ENSMUST00000175004 89 ntBASIC17.47■□□□□ 0.39
Lhx1P63006 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.47■□□□□ 0.39
Lhx1P63006 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lhx1P63006 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.47■□□□□ 0.39
Lhx1P63006 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx1P63006 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx1P63006 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx1P63006 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx1P63006 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lhx1P63006 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx1P63006 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx1P63006 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms