Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.92■□□□□ 0.78
Tpm1P58771 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tpm1P58771 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.92■□□□□ 0.78
Tpm1P58771 Gm12821-201ENSMUST00000120022 600 ntBASIC19.92■□□□□ 0.78
Tpm1P58771 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Tpm1P58771 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.92■□□□□ 0.78
Tpm1P58771 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tpm1P58771 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Tpm1P58771 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tpm1P58771 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Tpm1P58771 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.91■□□□□ 0.78
Tpm1P58771 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Gm21956-201ENSMUST00000179946 522 ntBASIC19.91■□□□□ 0.78
Tpm1P58771 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.91■□□□□ 0.78
Tpm1P58771 Gm8969-201ENSMUST00000199694 526 ntBASIC19.91■□□□□ 0.78
Tpm1P58771 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Tpm1P58771 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpm1P58771 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Tpm1P58771 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.9■□□□□ 0.78
Tpm1P58771 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tpm1P58771 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tpm1P58771 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tpm1P58771 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpm1P58771 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tpm1P58771 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Tpm1P58771 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.89■□□□□ 0.77
Tpm1P58771 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Tpm1P58771 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tpm1P58771 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpm1P58771 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.88■□□□□ 0.77
Tpm1P58771 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Tpm1P58771 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.88■□□□□ 0.77
Tpm1P58771 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tpm1P58771 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Tpm1P58771 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm1P58771 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Tpm1P58771 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.88■□□□□ 0.77
Tpm1P58771 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Tpm1P58771 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Tpm1P58771 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Tpm1P58771 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.87■□□□□ 0.77
Tpm1P58771 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.87■□□□□ 0.77
Tpm1P58771 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm1P58771 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms