Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccr8P56484 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccr8P56484 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccr8P56484 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccr8P56484 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Ccr8P56484 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccr8P56484 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.32■□□□□ 0.04
Ccr8P56484 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccr8P56484 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.32■□□□□ 0.04
Ccr8P56484 Gm4968-201ENSMUST00000071458 858 ntBASIC15.32■□□□□ 0.04
Ccr8P56484 Zfp783-201ENSMUST00000095946 670 ntBASIC15.32■□□□□ 0.04
Ccr8P56484 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccr8P56484 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccr8P56484 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.31■□□□□ 0.04
Ccr8P56484 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccr8P56484 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccr8P56484 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.31■□□□□ 0.04
Ccr8P56484 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ccr8P56484 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccr8P56484 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccr8P56484 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccr8P56484 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccr8P56484 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ccr8P56484 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccr8P56484 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccr8P56484 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ccr8P56484 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ccr8P56484 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccr8P56484 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.29■□□□□ 0.04
Ccr8P56484 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccr8P56484 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccr8P56484 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccr8P56484 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccr8P56484 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccr8P56484 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccr8P56484 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms