Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.91□□□□□ -0.02
Cks2P56390 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Cks2P56390 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.9□□□□□ -0.02
Cks2P56390 Gm22325-201ENSMUST00000158904 308 ntBASIC14.9□□□□□ -0.02
Cks2P56390 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.9□□□□□ -0.02
Cks2P56390 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.9□□□□□ -0.02
Cks2P56390 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cks2P56390 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Cks2P56390 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cks2P56390 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks2P56390 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cks2P56390 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.89□□□□□ -0.03
Cks2P56390 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cks2P56390 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.89□□□□□ -0.03
Cks2P56390 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.89□□□□□ -0.03
Cks2P56390 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cks2P56390 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cks2P56390 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cks2P56390 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.89□□□□□ -0.03
Cks2P56390 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.89□□□□□ -0.03
Cks2P56390 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks2P56390 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cks2P56390 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.88□□□□□ -0.03
Cks2P56390 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cks2P56390 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cks2P56390 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks2P56390 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.87□□□□□ -0.03
Cks2P56390 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.87□□□□□ -0.03
Cks2P56390 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cks2P56390 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.87□□□□□ -0.03
Cks2P56390 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.87□□□□□ -0.03
Cks2P56390 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Cks2P56390 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks2P56390 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.86□□□□□ -0.03
Cks2P56390 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cks2P56390 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cks2P56390 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms