Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ephb3P54754 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ephb3P54754 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ephb3P54754 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.7■□□□□ 0.58
Ephb3P54754 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ephb3P54754 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ephb3P54754 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.69■□□□□ 0.58
Ephb3P54754 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ephb3P54754 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ephb3P54754 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ephb3P54754 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Ephb3P54754 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ephb3P54754 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.68■□□□□ 0.58
Ephb3P54754 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ephb3P54754 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ephb3P54754 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ephb3P54754 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Gm16061-201ENSMUST00000122167 857 ntBASIC18.67■□□□□ 0.58
Ephb3P54754 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ephb3P54754 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ephb3P54754 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ephb3P54754 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ephb3P54754 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.66■□□□□ 0.58
Ephb3P54754 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.66■□□□□ 0.58
Ephb3P54754 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ephb3P54754 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ephb3P54754 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ephb3P54754 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ephb3P54754 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ephb3P54754 Gm17807-201ENSMUST00000186869 298 ntBASIC18.65■□□□□ 0.58
Ephb3P54754 Gm4974-201ENSMUST00000209974 875 ntBASIC18.65■□□□□ 0.58
Ephb3P54754 Gm21559-201ENSMUST00000220638 855 ntBASIC18.65■□□□□ 0.58
Ephb3P54754 Gm8587-201ENSMUST00000076538 843 ntBASIC18.65■□□□□ 0.58
Ephb3P54754 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ephb3P54754 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ephb3P54754 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ephb3P54754 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ephb3P54754 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ephb3P54754 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ephb3P54754 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ephb3P54754 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ephb3P54754 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ephb3P54754 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Gm29518-201ENSMUST00000190858 372 ntBASIC18.64■□□□□ 0.57
Ephb3P54754 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.64■□□□□ 0.57
Ephb3P54754 Gm7791-201ENSMUST00000219066 539 ntBASIC18.64■□□□□ 0.57
Ephb3P54754 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ephb3P54754 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ephb3P54754 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ephb3P54754 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.63■□□□□ 0.57
Ephb3P54754 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ephb3P54754 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Gm5587-201ENSMUST00000206270 674 ntBASIC18.63■□□□□ 0.57
Ephb3P54754 Gm7370-201ENSMUST00000219471 767 ntBASIC18.63■□□□□ 0.57
Ephb3P54754 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ephb3P54754 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ephb3P54754 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ephb3P54754 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ephb3P54754 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ephb3P54754 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms