Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nub1P54729 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.17■□□□□ 0.66
Nub1P54729 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.16■□□□□ 0.66
Nub1P54729 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Nub1P54729 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nub1P54729 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nub1P54729 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Nub1P54729 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Trmt13-210ENSMUST00000198454 880 ntBASIC19.15■□□□□ 0.66
Nub1P54729 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.15■□□□□ 0.66
Nub1P54729 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.15■□□□□ 0.66
Nub1P54729 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nub1P54729 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nub1P54729 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nub1P54729 Grk6-206ENSMUST00000224995 2971 ntBASIC19.14■□□□□ 0.66
Nub1P54729 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nub1P54729 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nub1P54729 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.14■□□□□ 0.65
Nub1P54729 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nub1P54729 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nub1P54729 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nub1P54729 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nub1P54729 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nub1P54729 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nub1P54729 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Nub1P54729 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.13■□□□□ 0.65
Nub1P54729 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.13■□□□□ 0.65
Nub1P54729 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.13■□□□□ 0.65
Nub1P54729 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nub1P54729 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nub1P54729 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Nub1P54729 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Gm27011-201ENSMUST00000182352 972 ntBASIC19.12■□□□□ 0.65
Nub1P54729 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.12■□□□□ 0.65
Nub1P54729 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nub1P54729 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.11■□□□□ 0.65
Nub1P54729 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nub1P54729 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Nub1P54729 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nub1P54729 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.11■□□□□ 0.65
Nub1P54729 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms