Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek1P51954 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nek1P51954 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek1P51954 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nek1P51954 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek1P51954 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek1P51954 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek1P51954 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.83■□□□□ 0.77
Nek1P51954 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.83■□□□□ 0.77
Nek1P51954 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nek1P51954 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Nek1P51954 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.83■□□□□ 0.77
Nek1P51954 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek1P51954 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.83■□□□□ 0.76
Nek1P51954 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.83■□□□□ 0.76
Nek1P51954 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.83■□□□□ 0.76
Nek1P51954 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.82■□□□□ 0.76
Nek1P51954 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nek1P51954 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.82■□□□□ 0.76
Nek1P51954 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Nek1P51954 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nek1P51954 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nek1P51954 Idnk-204ENSMUST00000226010 1898 ntBASIC19.82■□□□□ 0.76
Nek1P51954 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.81■□□□□ 0.76
Nek1P51954 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nek1P51954 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.81■□□□□ 0.76
Nek1P51954 Gm6211-202ENSMUST00000167849 925 ntBASIC19.81■□□□□ 0.76
Nek1P51954 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.81■□□□□ 0.76
Nek1P51954 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.81■□□□□ 0.76
Nek1P51954 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nek1P51954 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nek1P51954 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nek1P51954 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nek1P51954 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nek1P51954 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nek1P51954 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nek1P51954 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Mir7071-201ENSMUST00000184847 69 ntBASIC19.8■□□□□ 0.76
Nek1P51954 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.8■□□□□ 0.76
Nek1P51954 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.8■□□□□ 0.76
Nek1P51954 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.8■□□□□ 0.76
Nek1P51954 Gm10812-201ENSMUST00000099864 546 ntBASIC19.8■□□□□ 0.76
Nek1P51954 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nek1P51954 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nek1P51954 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.79■□□□□ 0.76
Nek1P51954 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nek1P51954 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 Gm20049-201ENSMUST00000219950 730 ntBASIC19.79■□□□□ 0.76
Nek1P51954 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nek1P51954 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nek1P51954 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nek1P51954 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms